This is known as the 'taxonomic identifier' or 'taxid'.More.Taxonomic identifier i This subsection of the Names and taxonomy section shows the unique identifier assigned by the NCBI to the source organism of the protein. This subsection of the Names and taxonomy section provides information on the name(s) of the organism that is the source of the protein iĬricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus) Imported Information which has been imported from another database using automatic procedures.Īutomatic assertion inferred from database entries iĭNA damage, DNA recombination ARBA annotation Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of i Molecular function UniProtKB Keywords constitute a controlled vocabulary with a hierarchical structure. transcription coactivator activity Source: UniProtKB.site-specific endodeoxyribonuclease activity, specific for altered base Source: Ensembl.phosphoric diester hydrolase activity Source: Ensembl.oxidoreductase activity Source: UniProtKB.double-stranded telomeric DNA binding Source: Ensembl.double-stranded DNA exodeoxyribonuclease activity Source: Ensembl.DNA-(apurinic or apyrimidinic site) endonuclease activity Source: Ensembl.3'-5' exonuclease activity Source: Ensembl.The Gene Ontology (GO) project provides a set of hierarchical controlled vocabulary split into 3 categories:More.GO - Molecular function i Note: Probably binds two magnesium or manganese ions per subunit. See the description of this molecule in ChEBI.Search chemical reactions in Rhea for this molecule.Search proteins in UniProtKB for this molecule.Like for installation from CRAN, installing a package from GitHub can be done in different ways, so your way is certainly the best one. If you want to know more about ape's development, see the Development section. It is mainly directed to maintainers of packages depending on ape, though it can be used by those who are curious about new features. The testing version includes new features that will be included in the future version on CRAN. There can be exceptions to this scheme if a quick bug-fixing release is needed on CRAN (e.g., version 5.4-1). With this system the testing version number is always larger than the current CRAN version, but always smaller than the next one. ) while the testing version is numbered x.y-t where x.y is the current version on CRAN, and t is 1, 2. The stable version on CRAN is usually numbered x.y (1.0, 1.1, 2.0. The version of ape on GitHub is considered as testing. There is no fixed schedule for a new release though they usually happen once or twice in a year. The version of ape on CRAN is considered stable.
#APE SEQUENCE INSTALL#
Anyway, most package installation procedures also install the suggested packages (and Rcpp at the same time). This means that ape can be installed and used even if these packages are not installed, but you won't be able to use a few of ape's functions (e.g., compar.gee). Three other packages are suggested: expm, gee, and igraph. There are no other requirement and ape runs under all operating systems where R can be installed, and under any running environment (Emacs/ESS, RStudio. In addition, the package Rcpp (0.12.0 or higher) must be installed on your machine. There are many different ways to install R packages, so your way is certainly the best one only the essential information are given here.Īpe requires R 3.2.0 or higher. If you need to install R, all required information can be found on the CRAN website. This package is distributed and maintained by the Debian Team. As a binary package for Linux Debian (and its derivatives like Ubuntu).☰ Installation from CRAN | Installation from GitHubĪpe is distributed in three different ways: